Typedefs
Typedefs

TAlignQualityStore (FragmentStore) | Type of the alignQualityStore member.
TAlignedReadStore (FragmentStore) | Type of the alignedReadStore member.
TAlignedReadTagStore (FragmentStore) | Type of the alignedReadTagStore member.
TAnnotationKeyStore (FragmentStore) | Type of the annotationKeyStore member.
TAnnotationNameStore (FragmentStore) | Type of the annotationNameStore member.
TAnnotationStore (FragmentStore) | Type of the annotationStore member.
TAnnotationTypeStore (FragmentStore) | Type of the annotationTypeStore member.
TContigFileStore (FragmentStore) | Type of the contigFileStore member.
TContigNameStore (FragmentStore) | Type of the contigNameStore member.
TContigSeq (ContigStoreElement) | Type of the seq member.
TContigStore (FragmentStore) | Type of the contigStore member.
TGapAnchors (AlignedReadStoreElement) | Type of the gaps member.
TGapAnchors (ContigStoreElement) | Type of the gaps member.
TId (AlignedReadStoreElement) | Type of all stored ids.
TId (AnnotationStoreElement) | Type of annotationId and contigId.
TLibraryNameStore (FragmentStore) | Type of the libraryNameStore member.
TLibraryStore (FragmentStore) | Type of the libraryStore member.
TMatePairNameStore (FragmentStore) | Type of the matePairNameStore member.
TMatePairStore (FragmentStore) | Type of the matePairStore member.
TNameStore (BamIOContext) | The name store class.
TNameStore (BedIOContext) | The name store class.
TNameStore (GffIOContext) | The name store class.
TNameStore (RoiIOContext) | The name store class.
TNameStoreCache (BamIOContext) | The name store cache class.
TNameStoreCache (BedIOContext) | The name store cache class.
TNameStoreCache (GffIOContext) | The name store cache class.
TNameStoreCache (RoiIOContext) | The name store cache class.
TPos (AlignedReadStoreElement) | Type of the beginPos and endPos members.
TPos (AnnotationStoreElement) | Type of the beginPos and endPos members.
TPos (ContigStoreElement) | Type of the fileBeginPos and fileEndPos members.
TReadNameStore (FragmentStore) | Type of the readNameStore member.
TReadSeqStore (FragmentStore) | Type of the readSeqStore member.
TReadStore (FragmentStore) | Type of the readStore member.
TSpec (AlignedReadStoreElement) | The specialization type.
TSpec (ContigStoreElement) | The specialization type.
TTag (BamHeaderRecord) | Pair to use for storing tags.
TTagName (BamHeaderRecord) | Type of the tag keys.
TTagValue (BamHeaderRecord) | Type of the tag values.
TTags (BamHeaderRecord) | Type of the string of tag Pairs.
TValues (AnnotationStoreElement) | StringSet type of the values member.

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