| Metafunction Position Type of an object that represents a position in a container. Position<T>::Type Include Headers seqan/basic.h Parameters
T | Type for which the position type is determined. Types: AlignCols, Finder, FrequencyDistribution, Gaps, Iter, Journaled String, SeedSet, std::basic_string, std::list, std::vector, std::vector, String, StringEnumerator, thrust::device_vector
Return Values
Type | Position type of T.
Member of SeedSet, std::basic_string, Journaled String, thrust::device_vector, Gaps, Finder, std::vector, StringEnumerator, std::list Functions
beginPosition | Return the clipping begin position as a source position.
clippedBeginPosition | Return the begin position of the clipping in the unclipped gapped sequence.
clippedEndPosition | Return the end position of the clipping in the unclipped gapped sequence.
endPosition | Return the clipping end position as a source position.
hostToVirtualPosition | Translates position in host to virtual (view) position.
infix | Creates infix object.
infixWithLength | Creates infix object.
insertGap | Insert one gap into a gapped sequence.
insertGaps | Insert multiple gaps into a gapped sequence.
isGap | Query whether a given clipped view position is a gap.
prefix | Creates prefix object.
removeGap | Remove one gap from a gapped sequence.
removeGaps | Remove multiple gaps from a gapped sequence.
setBeginPosition | Sets begin position of object in host.
setClippedBeginPosition | Sets the begin position of the clipping.
setClippedEndPosition | Sets the end position of the clipping.
setEndPosition | Sets begin position of object in host.
suffix | Creates suffix object.
virtualToHostPosition | Translates virtual (view) position to position in host.
Part of Concept Container, RootedRandomAccessIteratorConcept See Also Position Iterator, iter, Iterator, getValue SeqAn - Sequence Analysis Library - www.seqan.de

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