| Function getQualityValue Returns the quality of a character from an alphabet with integrated quality, e.g. the quality associated with a specified element from a sequence. getQualityValue(c) Include Headers seqan/basic.h Parameters
c | Character to retrieve the quality from. Types: AlphabetWithQualitiesConcept, Dna5Q, DnaQ
Return Values Quality value of c. Types: int Remarks: The quality value is an integral value between 0 and 62 (inclusive). Member of DnaQ Examples String<Dna5Q> seq = "TATA"; // Assign quality value to first 'T' in sequence seq assignQualityValue(seq[0], 35); // Print quality value of first 'T', and default quality value of first 'A' std::cout << getQualityValue(seq[0]) << std::endl; // Defined as 35 std::cout << getQualityValue(seq[1]) << std::endl; // Default value 60 Part of Concept AlphabetWithQualitiesConcept See Also convertQuality, assignQualityValue SeqAn - Sequence Analysis Library - www.seqan.de

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