| Function clippedBeginPosition Return the begin position of the clipping in the unclipped gapped sequence. TPosition clippedBeginPosition(gaps) Include Headers seqan/align.h Parameters
gaps | The Gaps object to query. Types: Gaps
Return Values The begin position of the current clipped view in the unclipped gapped sequence. Types: Position Member of Gaps Examples In the following gaps configuration, the result of clippedBeginPosition(gaps) is 1. clipping [ ) (half-open interval) gapped sequence: X--XXX-XX- source position: 0111234456 unclipped view position: 0123456789 clipped view position: 0123456 See Also setEndPosition, beginPosition, setClippedEndPosition, endPosition, setClippedBeginPosition, clippedEndPosition, setBeginPosition SeqAn - Sequence Analysis Library - www.seqan.de

Page built @2014/10/13 16:12:57