| Class Specialization GlobalChain Selects an anchor based method to join a Journaled String to a global reference sequence.
JoinConfig
GlobalChain
GlobalChain<TStrategyTag> Include Headers seqan/journal_set.h Parameters
TStrategyTag | The strategy used to compute the journal. Types: JournaledCompact, JournaledManhatten
Remarks The JournaledManhatten strategy fills the gaps between the anchors with a single insertion node, while the corresponding part of the reference sequence is deleted. Specialization of JoinConfig Functions
join | Joins a Journaled String to a Journaled Set by computing and journaling differences to the global reference sequence. (JoinConfig)
See Also GlobalAlign SeqAn - Sequence Analysis Library - www.seqan.de

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