# Elastic Net Penalized Maximum Likelihood for Structural Equation Models with Network GPT Framework

## Documentation for package ‘sparseSEM’ version 4.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

sparseSEM-package | sparseSEM: Elastic Net Penalized Maximum Likelihood for Structural Equation Models with Network GPT Framework
B | True network edges
elasticNetSEM | The Elastic Net penalized SEM with Network GPT Framework
elasticNetSEMcv | The Elastic Net penalty for SEM with user supplied (alphas, lambdas) for grid search
elasticNetSEMpoint | The Elastic Net penalty for SEM
enSEM_stability_selection | Stability Selection for the Elastic Net penalized SEM
enSEM_stability_selection_parallel | Parallel Stability Selection for the Elastic Net penalized SEM
lassoSEM | The Lasso penalty for SEM
Missing | Missing Network Node dependent variable data
sparseSEM | sparseSEM: Elastic Net Penalized Maximum Likelihood for Structural Equation Models with Network GPT Framework
X | Genotype matrix
Y | Gene expression matrix
yeast cisQTL GRN | Yeast cis-QTL Gene Regulatory Network Dataset