appendDatasetCreationToHDF5DumpLog	dump-management
character_OR_H5File	H5File-class
character_OR_H5File-class	H5File-class
check_and_delete_files	HDF5Array-internals
chunkdim,CSC_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
chunkdim,CSR_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
chunkdim,HDF5ArraySeed-method	HDF5ArraySeed-class
chunkdim,HDF5RealizationSink-method	writeHDF5Array
chunkdim,ReshapedHDF5ArraySeed-method	ReshapedHDF5ArraySeed-class
chunkdim,TENxRealizationSink-method	writeTENxMatrix
class:character_OR_H5File	H5File-class
class:CSC_H5ADMatrixSeed	H5ADMatrixSeed-class
class:CSC_H5SparseMatrixSeed	H5SparseMatrixSeed-class
class:CSR_H5ADMatrixSeed	H5ADMatrixSeed-class
class:CSR_H5SparseMatrixSeed	H5SparseMatrixSeed-class
class:Dense_H5ADMatrixSeed	H5ADMatrixSeed-class
class:H5ADMatrix	H5ADMatrix-class
class:H5ADMatrixSeed	H5ADMatrixSeed-class
class:H5DSetDescriptor	H5File-class
class:H5File	H5File-class
class:H5FileID	H5File-class
class:H5SparseMatrix	H5SparseMatrix-class
class:H5SparseMatrixSeed	H5SparseMatrixSeed-class
class:HDF5Array	HDF5Array-class
class:HDF5ArraySeed	HDF5ArraySeed-class
class:HDF5Matrix	HDF5Array-class
class:HDF5RealizationSink	writeHDF5Array
class:ReshapedHDF5Array	ReshapedHDF5Array-class
class:ReshapedHDF5ArraySeed	ReshapedHDF5ArraySeed-class
class:ReshapedHDF5Matrix	ReshapedHDF5Array-class
class:TENxMatrix	TENxMatrix-class
class:TENxMatrixSeed	TENxMatrixSeed-class
class:TENxRealizationSink	writeTENxMatrix
close,TENxRealizationSink-method	writeTENxMatrix
close.H5File	H5File-class
close.H5FileID	H5File-class
coerce,ANY,HDF5Array-method	writeHDF5Array
coerce,ANY,HDF5Matrix-method	HDF5Array-class
coerce,ANY,ReshapedHDF5Matrix-method	ReshapedHDF5Array-class
coerce,ANY,TENxMatrix-method	writeTENxMatrix
coerce,CSC_H5SparseMatrixSeed,dgCMatrix-method	H5SparseMatrixSeed-class
coerce,CSC_H5SparseMatrixSeed,sparseMatrix-method	H5SparseMatrixSeed-class
coerce,CSR_H5SparseMatrixSeed,dgCMatrix-method	H5SparseMatrixSeed-class
coerce,CSR_H5SparseMatrixSeed,sparseMatrix-method	H5SparseMatrixSeed-class
coerce,DelayedArray,HDF5Array-method	writeHDF5Array
coerce,DelayedArray,TENxMatrix-method	writeTENxMatrix
coerce,DelayedMatrix,HDF5Matrix-method	writeHDF5Array
coerce,DelayedMatrix,TENxMatrix-method	writeTENxMatrix
coerce,H5ADMatrix,dgCMatrix-method	H5ADMatrix-class
coerce,H5ADMatrix,sparseMatrix-method	H5ADMatrix-class
coerce,H5File,H5IdComponent-method	H5File-class
coerce,H5SparseMatrix,dgCMatrix-method	H5SparseMatrix-class
coerce,H5SparseMatrix,sparseMatrix-method	H5SparseMatrix-class
coerce,HDF5Array,HDF5Matrix-method	HDF5Array-class
coerce,HDF5Matrix,HDF5Array-method	HDF5Array-class
coerce,HDF5RealizationSink,DelayedArray-method	writeHDF5Array
coerce,HDF5RealizationSink,HDF5Array-method	writeHDF5Array
coerce,HDF5RealizationSink,HDF5ArraySeed-method	writeHDF5Array
coerce,ReshapedHDF5Array,ReshapedHDF5Matrix-method	ReshapedHDF5Array-class
coerce,ReshapedHDF5Matrix,ReshapedHDF5Array-method	ReshapedHDF5Array-class
coerce,TENxMatrix,dgCMatrix-method	TENxMatrix-class
coerce,TENxMatrix,sparseMatrix-method	TENxMatrix-class
coerce,TENxRealizationSink,DelayedArray-method	writeTENxMatrix
coerce,TENxRealizationSink,TENxMatrix-method	writeTENxMatrix
coerce,TENxRealizationSink,TENxMatrixSeed-method	writeTENxMatrix
create_dir	HDF5Array-internals
CSC_H5ADMatrixSeed	H5ADMatrixSeed-class
CSC_H5ADMatrixSeed-class	H5ADMatrixSeed-class
CSC_H5SparseMatrixSeed	H5SparseMatrixSeed-class
CSC_H5SparseMatrixSeed-class	H5SparseMatrixSeed-class
CSR_H5ADMatrixSeed	H5ADMatrixSeed-class
CSR_H5ADMatrixSeed-class	H5ADMatrixSeed-class
CSR_H5SparseMatrixSeed	H5SparseMatrixSeed-class
CSR_H5SparseMatrixSeed-class	H5SparseMatrixSeed-class
DelayedArray,H5ADMatrixSeed-method	H5ADMatrix-class
DelayedArray,H5SparseMatrixSeed-method	H5SparseMatrix-class
DelayedArray,HDF5ArraySeed-method	HDF5Array-class
DelayedArray,ReshapedHDF5ArraySeed-method	ReshapedHDF5Array-class
DelayedArray,TENxMatrixSeed-method	TENxMatrix-class
Dense_H5ADMatrixSeed	H5ADMatrixSeed-class
Dense_H5ADMatrixSeed-class	H5ADMatrixSeed-class
destroy_H5DSetDescriptor	H5File-class
dim,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
dim,HDF5ArraySeed-method	HDF5ArraySeed-class
dim,ReshapedHDF5ArraySeed-method	ReshapedHDF5ArraySeed-class
dimnames,Dense_H5ADMatrixSeed-method	H5ADMatrixSeed-class
dimnames,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
dimnames,HDF5ArraySeed-method	HDF5ArraySeed-class
dimnames,HDF5RealizationSink-method	writeHDF5Array
dimnames,TENxRealizationSink-method	writeTENxMatrix
dump-management	dump-management
extractNonzeroDataByCol	H5SparseMatrixSeed-class
extractNonzeroDataByCol,CSC_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
extractNonzeroDataByCol,H5ADMatrix-method	H5ADMatrix-class
extractNonzeroDataByCol,H5SparseMatrix-method	H5SparseMatrix-class
extractNonzeroDataByCol,TENxMatrix-method	TENxMatrix-class
extractNonzeroDataByRow	H5SparseMatrixSeed-class
extractNonzeroDataByRow,CSR_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
extractNonzeroDataByRow,H5ADMatrix-method	H5ADMatrix-class
extractNonzeroDataByRow,H5SparseMatrix-method	H5SparseMatrix-class
extract_array,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
extract_array,HDF5ArraySeed-method	HDF5ArraySeed-class
extract_array,ReshapedHDF5ArraySeed-method	ReshapedHDF5ArraySeed-class
getHDF5DumpChunkDim	dump-management
getHDF5DumpChunkLength	dump-management
getHDF5DumpChunkShape	dump-management
getHDF5DumpCompressionLevel	dump-management
getHDF5DumpDir	dump-management
getHDF5DumpFile	dump-management
getHDF5DumpName	dump-management
get_h5dimnames	h5writeDimnames
get_h5mread_returned_type	h5mread
H5ADMatrix	H5ADMatrix-class
H5ADMatrix-class	H5ADMatrix-class
H5ADMatrixSeed	H5ADMatrixSeed-class
H5ADMatrixSeed-class	H5ADMatrixSeed-class
H5DSetDescriptor	H5File-class
H5DSetDescriptor-class	H5File-class
H5File	H5File-class
H5File-class	H5File-class
H5FileID	H5File-class
H5FileID-class	H5File-class
h5ls	h5ls
h5mread	h5mread
h5mread_from_reshaped	h5mread_from_reshaped
h5readDimnames	h5writeDimnames
H5SparseMatrix	H5SparseMatrix-class
H5SparseMatrix-class	H5SparseMatrix-class
H5SparseMatrixSeed	H5SparseMatrixSeed-class
H5SparseMatrixSeed-class	H5SparseMatrixSeed-class
h5writeDimnames	h5writeDimnames
HDF5-dump-management	dump-management
HDF5Array	HDF5Array-class
HDF5Array-class	HDF5Array-class
HDF5Array-internals	HDF5Array-internals
HDF5ArraySeed	HDF5ArraySeed-class
HDF5ArraySeed-class	HDF5ArraySeed-class
HDF5Matrix	HDF5Array-class
HDF5Matrix-class	HDF5Array-class
HDF5RealizationSink	writeHDF5Array
HDF5RealizationSink-class	writeHDF5Array
is_sparse,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
is_sparse,HDF5ArraySeed-method	HDF5ArraySeed-class
is_sparse,HDF5RealizationSink-method	writeHDF5Array
is_sparse<-,HDF5Array-method	HDF5Array-class
is_sparse<-,HDF5ArraySeed-method	HDF5ArraySeed-class
loadHDF5SummarizedExperiment	saveHDF5SummarizedExperiment
lsHDF5DumpFile	dump-management
matrixClass,HDF5Array-method	HDF5Array-class
matrixClass,ReshapedHDF5Array-method	ReshapedHDF5Array-class
OLD_extract_sparse_array,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
OLD_extract_sparse_array,HDF5ArraySeed-method	HDF5ArraySeed-class
open.H5File	H5File-class
open.H5FileID	H5File-class
path,H5File-method	H5File-class
path,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
path,HDF5ArraySeed-method	HDF5ArraySeed-class
path<-,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
path<-,HDF5ArraySeed-method	HDF5ArraySeed-class
quickResaveHDF5SummarizedExperiment	saveHDF5SummarizedExperiment
read_sparse_block,H5ADMatrix-method	H5ADMatrix-class
read_sparse_block,H5SparseMatrix-method	H5SparseMatrix-class
read_sparse_block,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
read_sparse_block,TENxMatrix-method	TENxMatrix-class
replace_dir	HDF5Array-internals
ReshapedHDF5Array	ReshapedHDF5Array-class
ReshapedHDF5Array-class	ReshapedHDF5Array-class
ReshapedHDF5ArraySeed	ReshapedHDF5ArraySeed-class
ReshapedHDF5ArraySeed-class	ReshapedHDF5ArraySeed-class
ReshapedHDF5Matrix	ReshapedHDF5Array-class
ReshapedHDF5Matrix-class	ReshapedHDF5Array-class
restore_absolute_assay2h5_links	HDF5Array-internals
saveHDF5SummarizedExperiment	saveHDF5SummarizedExperiment
setHDF5DumpChunkLength	dump-management
setHDF5DumpChunkShape	dump-management
setHDF5DumpCompressionLevel	dump-management
setHDF5DumpDir	dump-management
setHDF5DumpFile	dump-management
setHDF5DumpName	dump-management
set_h5dimnames	h5writeDimnames
shorten_assay2h5_links	HDF5Array-internals
show,H5DSetDescriptor-method	H5File-class
show,H5File-method	H5File-class
show,H5FileID-method	H5File-class
show,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
showHDF5DumpLog	dump-management
sparsity	H5SparseMatrixSeed-class
sparsity,H5ADMatrix-method	H5ADMatrix-class
sparsity,H5SparseMatrix-method	H5SparseMatrix-class
sparsity,H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
sparsity,TENxMatrix-method	TENxMatrix-class
stop_if_bad_dir	HDF5Array-internals
t,CSC_H5ADMatrixSeed-method	H5ADMatrixSeed-class
t,CSC_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
t,CSR_H5ADMatrixSeed-method	H5ADMatrixSeed-class
t,CSR_H5SparseMatrixSeed-method	H5SparseMatrixSeed-class
t.CSC_H5ADMatrixSeed	H5ADMatrixSeed-class
t.CSC_H5SparseMatrixSeed	H5SparseMatrixSeed-class
t.CSR_H5ADMatrixSeed	H5ADMatrixSeed-class
t.CSR_H5SparseMatrixSeed	H5SparseMatrixSeed-class
TENxMatrix	TENxMatrix-class
TENxMatrix-class	TENxMatrix-class
TENxMatrixSeed	TENxMatrixSeed-class
TENxMatrixSeed-class	TENxMatrixSeed-class
TENxRealizationSink	writeTENxMatrix
TENxRealizationSink-class	writeTENxMatrix
type,HDF5ArraySeed-method	HDF5ArraySeed-class
type,HDF5RealizationSink-method	writeHDF5Array
type,TENxRealizationSink-method	writeTENxMatrix
updateObject,HDF5ArraySeed-method	HDF5ArraySeed-class
validate_HDF5ArraySeed_dataset_geometry	HDF5Array-internals
writeHDF5Array	writeHDF5Array
writeTENxMatrix	writeTENxMatrix
write_block,HDF5RealizationSink-method	writeHDF5Array
write_block,TENxRealizationSink-method	writeTENxMatrix
write_h5_assays	HDF5Array-internals
