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[ Module Hierarchy | Class Hierarchy ]

# Class Hierarchy

- nMOLDYN.Core.IOFiles.AmberNetCDFConverter: Converts an Amber NetCDF Trajectory into a MMTK NetCDFFile.
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Analysis.Analysis: Base class for all analysis defined in nMOLDYN.
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Structure.Analysis
- nMOLDYN.Analysis.Dynamics.AngularVelocity: An intermediate class used by |AngularVelocityAutoCorrelationFunction| and |AngularDensityOfStates| classes.
- nMOLDYN.Core.IOFiles.CHARMMConverter: Converts a CHARMM Trajectory into a MMTK NetCDFFile.
- nMOLDYN.Core.IOFiles.DL_POLYConverter: Converts a DL_POLY Trajectory into a MMTK NetCDFFile.
- nMOLDYN.GUI.HTMLReader.util.DataLoader
- logging.Filterer: A base class for loggers and handlers which allows them to share common code.
- Tkinter.Grid: Geometry manager Grid.
- nMOLDYN.GUI.HTMLReader.mfxutil.KwStruct
- nMOLDYN.Core.IOFiles.MaterialsStudioConverter: Converts a MaterialsStudio Discover or Forcite Trajectory into a MMTK NetCDFFile.
- nMOLDYN.GUI.HTMLReader.tkwidget.MfxScrolledCanvas
- nMOLDYN.GUI.HTMLReader.tkwidget.MfxTooltip
- Tkinter.Misc: Internal class.
- nMOLDYN.Core.IOFiles.NAMDConverter: Converts a NAMD Trajectory into a MMTK NetCDFFile.
- formatter.NullWriter: Minimal writer interface to use in testing & inheritance.
- Tkinter.Pack: Geometry manager Pack.
- nMOLDYN.Analysis.Template.ParallelPerAtom: Template class for an analysis atom-by-atom ran in parallel mode.
- nMOLDYN.Analysis.Template.ParallelPerFrame: Template class for an analysis frame-by-frame ran in parallel mode.
- nMOLDYN.Analysis.Template.ParallelPerGroup: Template class for an analysis group-by-group ran in parallel mode.
- nMOLDYN.Analysis.Template.ParallelPerQShell: Template class for an analysis qshell-by-qshell ran in parallel mode.
- markupbase.ParserBase: Parser base class which provides some common support methods used by the SGML/HTML and XHTML parsers.
- Tkinter.Place: Geometry manager Place.
- nMOLDYN.Analysis.Analysis.QVectors: Generates a set of QVectors within a given shell.
- nMOLDYN.Analysis.Template.SerialPerAtom: Template class for an analysis atom-by-atom ran in serial mode.
- nMOLDYN.Analysis.Template.SerialPerFrame: Template class for an analysis atom-by-atom ran in serial mode.
- nMOLDYN.Analysis.Template.SerialPerGroup: Template class for an analysis group-by-group ran in serial mode.
- nMOLDYN.Analysis.Template.SerialPerQShell: Template class for an analysis qshell-by-qshell ran in serial mode.
- nMOLDYN.GUI.HTMLReader.mfxutil.Struct
- nMOLDYN.Core.IOFiles.TemporaryFile: Creates a temporary file used to monitor (progress, start, end ...) an analysis.
- unittest.TestCase: A class whose instances are single test cases.
- nMOLDYN.GUI.HTMLReader.util.Timer
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.GUI.Widgets.Toplevel
- nMOLDYN.Core.IOFiles.VASPConverter: Converts a VASP Trajectory into a MMTK NetCDFFile.
- Tkinter.Wm: Provides functions for the communication with the window manager.
- nMOLDYN.GUI.HTMLReader.tkwidget._ToplevelDialog
- nMOLDYN.Core.Preferences.nMOLDYNPreferences.__Singleton
- nMOLDYN.GUI.PreferencesDialog.dummy
- object: The most base type
  - exceptions.BaseException: Common base class for all exceptions
    - exceptions.Exception: Common base class for all non-exit exceptions.
      - nMOLDYN.Core.IOFiles.EndOfFile
      - nMOLDYN.Core.Error.Error
      - exceptions.StandardError: Base class for all standard Python exceptions that do not represent interpreter exiting.
        - exceptions.AssertionError: Assertion failed.
      - nMOLDYN.GUI.HTMLReader.mfxutil.SubclassResponsibility
  - nMOLDYN.Core.IOFiles.DCDFile: Sets up a DCD file reader.
  - nMOLDYN.Core.IOFiles.FortranBinaryFile: Sets up a Fortran binary file reader.
  - float: float(x) -> floating point number
  - int: int(x[, base]) -> integer
  - nMOLDYN.Core.Preferences.nMOLDYNPreferences: Class whose attributes defines the nMOLDYN PREFERENCES variables.
- nMOLDYN.GUI.HTMLReader.tkhtml.tkHTMLViewer